BioMCP: Biomedical Model Context Protocol

Clustering scRNAseq by genotypes

using all the bits for echt rapid variant annotation and filtering

Oxbow makes genomic data ready for high-performance analytics.

Grep for FASTQ files

bioinformatics toolkit in rust

Command line utility for manipulating FASTQ files

Genome size estimation from long read overlaps

Fast FASTQ sample demultiplexing in Rust.

gia: Genomic Interval Arithmetic

A lightweight platform-accelerated library for biological motif scanning using position weight matrices.

Complex structural variant visualization for HiFi sequencing data

A small and fast FM-Index for Rust

Command line utility for working with next-generation sequencing files.

Targeted genotyper for complex polymorphic genes

ntHash implementation in Rust

A better, faster way to count guides in CRISPR screens.

Bioinformatics 101 tool for counting unique k-length substrings in DNA

Better and faster Rust implementation of the FragGeneScan gene prediction model for short and error-prone reads.